ReNunney/docs/WORKFLOW.md

Workflow

Daily Use

Initialize local state:

make init

Check paths:

make doctor

Run one local Track 1 simulation through the in-repo runner:

make track1-sim-smoke

Submit a Figure 1 treatment:

make submit-figure1-m10

Run jobs:

make run-loop

Collate completed results:

make collate-figure1

Inspect current status:

make status

Current Assumption

The Makefile now drives the local orchestration code in renunney, while the Track 1 runner/API boundary, analysis layer, threshold/search layer, and simulation kernel, report generator, and extinction-model data layer are also local to renunney, and the dataset generator is now local as well. The remaining Track 1 fit helper is still imported from the legacy cost_of_substitution directory through the compatibility layer in src/renunney/legacy.py. The paper-scale Figure 1 configs used for submission are now local to renunney/config.