29 lines
1.9 KiB
Markdown
29 lines
1.9 KiB
Markdown
Avida is a free, open source software platform for conducting and analyzing experiments with self-replicating and evolving computer programs. It provides detailed control over experimental settings and protocols, a large array of measurement tools, and sophisticated methods to analyze and post-process experimental data.
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The following articles provide a good introduction to Avida:
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* [Testing Darwian](http://www.carlzimmer.com/articles/2005.php?subaction=showfull&id=1177184710&archive=&start_from=&ucat=8&) by Carl Zimmer (Cover story of Feb 2005 Discover Magazine).
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* [Twice as Natural](http://myxo.css.msu.edu/lenski/pdf/2001,%20Nature,%20Lenski,%20twice%20as%20natural.pdf) by Richard Lenski (2001)
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* [Meet the Scientist](http://www.microbeworld.org/index.php?option=com_content&view=article&id=784:mts59-charles-ofria-&catid=37:meet-the-scientist&Itemid=1550) podcast interview of Charles Ofria by Carl Zimmer (2010)
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More detailed materials:
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* [About Digital Evolution](wiki/About)
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* [Avida: A Software Platform for Research in Computational Evolutionary Biology](http://www.cse.msu.edu/~ofria/pubs/2009AvidaIntro.pdf) by C. Ofria, D.M. Bryson, and C. Wilke (2009).
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* The contents of this Wiki
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If you would like to contribute to this documentation, please create an account via the log-in link at the top-right of the page.
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**[New User Information](wiki/New-User-Information)**
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## General Information
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* [Beginner Documentation](wiki/Beginner-Documentation)
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* [Overview](wiki/Overview)
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* [A Guided Tour of the Ancestor and its Hardware](wiki/Default-Ancestor-Guided-Tour)
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* [Text Viewer](wiki/Text-Viewer)
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* [Configuration and Command Reference](wiki/Configuration-and-Command-Reference)
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* [Experiment and Analysis Guides](wiki/Experiment-and-Analysis-Guides)
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## Developer Resources
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* [Developers Guide](wiki/Developers-Guide)
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* [Getting Started](wiki/Development-|-Getting-Started)
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* [Avida 3 API](wiki/Avida-3-API) |